Format

Send to:

Choose Destination

agaI putative deaminase AgaI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947985, updated on 6-May-2021

Summary

Gene symbol
agaI
Gene description
putative deaminase AgaI
Primary source
ASAP:ABE-0010317
Locus tag
b3141
See related
ECOCYC:G7636
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3129; yraG
Summary
Unlike other Escherichia coli strains, K-12 is unable to grow on N-acetylgalactosamine as a source of carbon and energy. [More information is available at EcoCyc: G7636].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (3286270..3287025)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene galactosamine-specific PTS enzyme IIB component Neighboring gene galactosamine-specific PTS enzyme IIC component Neighboring gene galactosamine-specific PTS enzyme IID component Neighboring gene putative fimbrial protein YraH Neighboring gene putative fimbrial chaperone YraI

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables galactosamine-6-phosphate isomerase activity NAS
Non-traceable Author Statement
more info
PubMed 
enables glucosamine-6-phosphate deaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in N-acetylneuraminate catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in UDP-N-acetylglucosamine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in glucosamine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3286270..3287025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417610.1 putative deaminase AgaI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417610.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P42912
    Conserved Domains (1) summary
    PRK09762
    Location:20251
    PRK09762; galactosamine-6-phosphate isomerase; Provisional
Support Center