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torY [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946490, updated on 24-Aug-2024

Summary

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Official Symbol
torY
Primary source
ASAP:ABE-0006246
Locus tag
b1873
See related
ECOCYC:G7023
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1874; yecK
Summary
TorY is a c-type cytochrome that is anchored to the inner membrane. [More information is available at EcoCyc: G7023].
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Genomic context

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Sequence:
NC_000913.3 (1957032..1958132, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene carboxy-S-adenosyl-L-methionine synthase Neighboring gene tRNA U34 carboxymethyltransferase Neighboring gene trimethylamine N-oxide reductase 2 Neighboring gene ncRNA Neighboring gene PF03932 family protein CutC Neighboring gene putative metal-binding enzyme YecM

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Alternative gene for biotin sulfoxide reduction in Escherichia coli K-12. del Campillo Campbell A, et al. J Mol Evol, 1996 Feb. PMID 8919859
  2. The torYZ (yecK bisZ) operon encodes a third respiratory trimethylamine N-oxide reductase in Escherichia coli. Gon S, et al. J Bacteriol, 2000 Oct. PMID 11004177, Free PMC Article
  3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
  4. Interaction network containing conserved and essential protein complexes in Escherichia coli. Butland G, et al. Nature, 2005 Feb 3. PMID 15690043
  5. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables electron transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
  
enables electron transfer activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables heme binding ISM
Inferred from Sequence Model
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within anaerobic electron transport chain IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in anaerobic respiration IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in anaerobic respiration IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Gram-negative-bacterium-type cell wall IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c quinol dehydrogenase TorY

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1957032..1958132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416387.1 cytochrome c quinol dehydrogenase TorY [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416387.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6N8R610
    Conserved Domains (2) summary
    TIGR02162
    Location:29 → 365
    torC; trimethylamine-N-oxide reductase c-type cytochrome TorC
    pfam03264
    Location:27 → 174
    Cytochrom_NNT; NapC/NirT cytochrome c family, N-terminal region
Nucleotide Protein
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Gene LinkOut

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