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torY cytochrome c quinol dehydrogenase TorY [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946490, updated on 23-Nov-2023

Summary

Gene symbol
torY
Gene description
cytochrome c quinol dehydrogenase TorY
Primary source
ASAP:ABE-0006246
Locus tag
b1873
See related
ECOCYC:G7023
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1874; yecK
Summary
TorY is a c-type cytochrome that is anchored to the inner membrane. [More information is available at EcoCyc: G7023].
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Genomic context

Sequence:
NC_000913.3 (1957032..1958132, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene carboxy-S-adenosyl-L-methionine synthase Neighboring gene tRNA U34 carboxymethyltransferase Neighboring gene trimethylamine N-oxide reductase 2 Neighboring gene ncRNA Neighboring gene PF03932 family protein CutC Neighboring gene putative metal-binding enzyme YecM

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables electron transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 
enables electron transfer activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables heme binding ISM
Inferred from Sequence Model
more info
PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within anaerobic electron transport chain IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in anaerobic respiration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in anaerobic respiration IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Gram-negative-bacterium-type cell wall IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 

General protein information

Preferred Names
cytochrome c quinol dehydrogenase TorY

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1957032..1958132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416387.1 cytochrome c quinol dehydrogenase TorY [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416387.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6N8R610
    Conserved Domains (2) summary
    TIGR02162
    Location:29365
    torC; trimethylamine-N-oxide reductase c-type cytochrome TorC
    pfam03264
    Location:27174
    Cytochrom_NNT; NapC/NirT cytochrome c family, N-terminal region