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astB N-succinylarginine dihydrolase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946259, updated on 19-Sep-2024

Summary

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Official Symbol
astB
Official Full Name
N-succinylarginine dihydrolase
Primary source
ECOCYC:G6941
Locus tag
b1745
See related
ASAP:ABE-0005817
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1743; ydjT
Summary
The subunit structure has not been determined. [More information is available at EcoCyc: G6941].
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Genomic context

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Sequence:
NC_000913.3 (1826916..1828259, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene excinuclease Cho Neighboring gene HutD family protein Ves Neighboring gene ATP-independent periplasmic chaperone Neighboring gene succinylglutamate desuccinylase Neighboring gene aldehyde dehydrogenase Neighboring gene arginine N-succinyltransferase Neighboring gene succinylornithine transaminase Neighboring gene exodeoxyribonuclease III

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of N-succinylarginine dihydrolase AstB, bound to substrate and product, an enzyme from the arginine catabolic pathway of Escherichia coli. Tocilj A, et al. J Biol Chem, 2005 Apr 22. PMID 15703173
  2. ArgR-independent induction and ArgR-dependent superinduction of the astCADBE operon in Escherichia coli. Kiupakis AK, et al. J Bacteriol, 2002 Jun. PMID 12003934, Free PMC Article
  3. Arginine catabolism and the arginine succinyltransferase pathway in Escherichia coli. Schneider BL, et al. J Bacteriol, 1998 Aug. PMID 9696779, Free PMC Article
  4. Prediction of the structure and function of AstA and AstB, the first two enzymes of the arginine succinyltransferase pathway of arginine catabolism. Shirai H, et al. FEBS Lett, 2003 Dec 18. PMID 14675764
  5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. possesses a flexible loop that is disordered in the absence of substrate and assumes an ordered conformation upon substrate binding
    Title: Crystal structure of N-succinylarginine dihydrolase AstB, bound to substrate and product, an enzyme from the arginine catabolic pathway of Escherichia coli.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables N-succinylarginine dihydrolase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables N-succinylarginine dihydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within arginine catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in arginine catabolic process to glutamate IEA
Inferred from Electronic Annotation
more info
  
involved_in arginine catabolic process to succinate IEA
Inferred from Electronic Annotation
more info
  
involved_in arginine metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-succinylarginine dihydrolase
NP_416259.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1826916..1828259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416259.1 N-succinylarginine dihydrolase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416259.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T5ZUM1
    Conserved Domains (1) summary
    PRK13281
    Location:1 → 441
    PRK13281; N-succinylarginine dihydrolase
Nucleotide Protein
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