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ydfC uncharacterized protein YdfC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946107, updated on 19-Sep-2024

Summary

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Official Symbol
ydfC
Official Full Name
uncharacterized protein YdfC
Primary source
ECOCYC:EG11302
Locus tag
b1573
See related
ASAP:ABE-0005255
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1567
Summary
ydfC was previously annotated in EcoGene as a truncated pseudogene Rz homolog in Qin/Kim, but a reassessment led to its restoration as an intact gene of unknown function. [More information is available at EcoGene: EG11302].
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Genomic context

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Sequence:
NC_000913.3 (1648823..1649041)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1391 domain-containing protein YdfA Neighboring gene uncharacterized protein YdfB Neighboring gene ncRNA Neighboring gene cell division inhibition protein DicB Neighboring gene lysis protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and sequence of gene dicB: translation of the division inhibitor from an in-phase internal start. Cam K, et al. Nucleic Acids Res, 1988 Jul 25. PMID 3041373, Free PMC Article
  2. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
  3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
uncharacterized protein YdfC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1648823..1649041
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416091.1 uncharacterized protein YdfC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416091.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7D7KEI1
Nucleotide Protein
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