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ssuA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945560, updated on 24-Aug-2024

Summary

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Official Symbol
ssuA
Primary source
ASAP:ABE-0003180
Locus tag
b0936
See related
ECOCYC:G6478
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0927; ycbO
Summary
First 21 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG13707]. SsuA is the periplasmic substrate-binding component of the alkanesulfonate ABC transporter. [More information is available at EcoCyc: G6478].
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Genomic context

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Sequence:
NC_000913.3 (995985..996944, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene aminopeptidase N Neighboring gene aliphatic sulfonate ABC transporter ATP binding subunit Neighboring gene aliphatic sulfonate ABC transporter membrane subunit Neighboring gene FMNH2-dependent alkanesulfonate monooxygenase Neighboring gene NADPH-dependent FMN reductase Neighboring gene putative laminin-binding fimbrial subunit Neighboring gene putative fimbrial chaperone ElfD

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sulfonate-sulfur metabolism and its regulation in Escherichia coli. van der Ploeg JR, et al. Arch Microbiol, 2001 Jul. PMID 11479697
  2. Deletion analysis of the Escherichia coli taurine and alkanesulfonate transport systems. Eichhorn E, et al. J Bacteriol, 2000 May. PMID 10781534, Free PMC Article
  3. The switch from inorganic to organic sulphur assimilation in Escherichia coli: adenosine 5'-phosphosulphate (APS) as a signalling molecule for sulphate excess. Bykowski T, et al. Mol Microbiol, 2002 Mar. PMID 11918818
  4. The Escherichia coli ssuEADCB gene cluster is required for the utilization of sulfur from aliphatic sulfonates and is regulated by the transcriptional activator Cbl. van Der Ploeg JR, et al. J Biol Chem, 1999 Oct 8. PMID 10506196
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ABC-type alkanesulfonate transporter transporter activity EXP
Inferred from Experiment
more info
 PubMed 
enables ATPase-coupled transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within alkanesulfonate transmembrane transport EXP
Inferred from Experiment
more info
 PubMed 
involved_in cellular response to sulfur starvation NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within sulfur compound metabolic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
located_in outer membrane-bounded periplasmic space RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
aliphatic sulfonate ABC transporter periplasmic binding protein
NP_415456.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    995985..996944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415456.4 aliphatic sulfonate ABC transporter periplasmic binding protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415456.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376FPP2
    Conserved Domains (1) summary
    PRK11553
    Location:1 → 313
    PRK11553; alkanesulfonate transporter substrate-binding subunit; Provisional
Nucleotide Protein
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