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ybjM putative inner membrane protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945477, updated on 19-Sep-2024

Summary

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Official Symbol
ybjM
Official Full Name
putative inner membrane protein
Primary source
ECOCYC:G6446
Locus tag
b0848
See related
ASAP:ABE-0002891
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0839
Summary
YbjM is an inner membrane protein with four predicted transmembrane domains. [More information is available at EcoCyc: G6446].
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Genomic context

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Sequence:
NC_000913.3 (890089..890466)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene putative transport protein YbjL Neighboring gene reduced glutaredoxin 1 Neighboring gene DUF1418 domain-containing protein YbjC Neighboring gene NADPH-dependent nitro/quinone reductase NfsA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide. Zheng M, et al. J Bacteriol, 2001 Aug. PMID 11443091, Free PMC Article
  2. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
  3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative inner membrane protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    890089..890466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415369.1 putative inner membrane protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415369.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1NDG3
    Conserved Domains (1) summary
    pfam11045
    Location:3 → 118
    YbjM; Putative inner membrane protein of Enterobacteriaceae
Nucleotide Protein
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