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gcl glyoxylate carboligase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945394, updated on 4-Apr-2024

Summary

Gene symbol
gcl
Gene description
glyoxylate carboligase
Primary source
ASAP:ABE-0001754
Locus tag
b0507
See related
ECOCYC:EG11583
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0500
Summary
Glyoxylate carboligase condenses two molecules of glyoxylate to form tartronate semialdehyde. [More information is available at EcoCyc: EG11583].
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Genomic context

Sequence:
NC_000913.3 (533916..535697)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ureidoglycolate lyase Neighboring gene DNA-binding transcriptional repressor AllR Neighboring gene ncRNA Neighboring gene hydroxypyruvate isomerase Neighboring gene tartronate semialdehyde reductase 2

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables FAD binding IDA
Inferred from Direct Assay
more info
PubMed 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables flavin adenine dinucleotide binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables identical protein binding IDA
Inferred from Direct Assay
more info
PubMed 
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables tartronate-semialdehyde synthase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables tartronate-semialdehyde synthase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables tartronate-semialdehyde synthase activity IEA
Inferred from Electronic Annotation
more info
 
enables thiamine pyrophosphate binding IDA
Inferred from Direct Assay
more info
PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in glycolate catabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within glycolate catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glyoxylate catabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within glyoxylate catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in isoleucine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in valine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of acetolactate synthase complex IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
glyoxylate carboligase
NP_415040.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    533916..535697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415040.1 glyoxylate carboligase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415040.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2W6PAS9, A0A5B9ADS9
    Conserved Domains (1) summary
    PRK11269
    Location:1587
    PRK11269; glyoxylate carboligase; Provisional