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ybhK [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945390, updated on 24-Aug-2024

Summary

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Official Symbol
ybhK
Primary source
ASAP:ABE-0002661
Locus tag
b0780
See related
ECOCYC:G6402
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0769
Summary
The function of YbhK in Escherichia coli is not known. [More information is available at EcoCyc: G6402].
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Genomic context

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Sequence:
NC_000913.3 (815739..816647, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene malonyl-acyl carrier protein methyltransferase Neighboring gene dethiobiotin synthetase Neighboring gene UvrABC excision nuclease subunit B Neighboring gene GTP 3',8'-cyclase Neighboring gene protein MoaB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. YvcK of Bacillus subtilis is required for a normal cell shape and for growth on Krebs cycle intermediates and substrates of the pentose phosphate pathway. Görke B, et al. Microbiology (Reading), 2005 Nov. PMID 16272399
  2. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Qin ZS, et al. Nat Biotechnol, 2003 Apr. PMID 12627170
  3. Factors influencing the identification of transcription factor binding sites by cross-species comparison. McCue LA, et al. Genome Res, 2002 Oct. PMID 12368244, Free PMC Article
  4. Interaction network containing conserved and essential protein complexes in Escherichia coli. Butland G, et al. Nature, 2005 Feb 3. PMID 15690043
  5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables LPPG:FO 2-phospho-L-lactate transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative transferase YbhK

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    815739..816647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415301.1 putative transferase YbhK [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415301.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6L7CEQ9
    Conserved Domains (1) summary
    cl00425
    Location:12 → 299
    CofD_YvcK; Family of CofD-like proteins and proteins related to YvcK
Nucleotide Protein
Heading Accession and Version

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