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PMSVgp1 capsid protein [ Panicum mosaic satellite virus ]

Gene ID: 944443, updated on 18-Aug-2023

Summary

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Gene symbol
PMSVgp1
Gene description
capsid protein
Locus tag
PMSVgp1
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Panicum mosaic satellite virus
Lineage
Viruses; Virus families not assigned to an order; Papanivirus
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Genomic context

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Location:
clone: pC9
Sequence:
NC_003847.1 (89..562)

NC_003847.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003847.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Two-Amino Acid Difference in the Coat Protein of Satellite panicum mosaic virus Isolates Is Responsible for Differential Synergistic Interactions with Panicum mosaic virus. Chowda-Reddy RV, et al. Mol Plant Microbe Interact, 2019 Apr. PMID 30379112
  2. The complex subcellular distribution of satellite panicum mosaic virus capsid protein reflects its multifunctional role during infection. Qi D, et al. Virology, 2008 Jun 20. PMID 18440039
  3. Analysis of the genome of satellite panicum mosaic virus. Masuta C, et al. Virology, 1987 Aug. PMID 18644571

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Mutation of amino acid residues at these positions in different combinations in SPMV-KS, similar to those as in SPMV-Type or vice-versa, revealed that A35 and R98 in SPMV-KS CP play critical roles in enhanced synergistic interactions with PMV isolates
    Title: A Two-Amino Acid Difference in the Coat Protein of Satellite panicum mosaic virus Isolates Is Responsible for Differential Synergistic Interactions with Panicum mosaic virus.
  2. That Satellite panicum mosaic virus capsid protein is found both in the nucleus and the cell wall suggests its involvement in viral nuclear import and cell-to-cell transport.
    Title: The complex subcellular distribution of satellite panicum mosaic virus capsid protein reflects its multifunctional role during infection.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
capsid protein
NP_620827.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003847.1 Reference assembly

    Range
    89..562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_620827.1 capsid protein [Panicum mosaic satellite virus]

    See identical proteins and their annotated locations for NP_620827.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q86993, Q88305
    Conserved Domains (1) summary
    pfam06184
    Location:5 → 157
    Potex_coat; Potexvirus coat protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
1STM_A.1
1STM_B.1
1STM_C.1
1STM_D.1
1STM_E.1
5CW0_A.1
Q86993.1

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