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yodR putative acyloate-acetoacetate CoA-transferase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 940048, updated on 12-Feb-2021

Summary

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Gene symbol
yodR
Gene description
putative acyloate-acetoacetate CoA-transferase
Locus tag
BSU_19720
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU19720
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Genomic context

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Sequence:
NC_000964.3 (2143022..2143675, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene lysine 2,3-aminomutase Neighboring gene epsilon-amino-beta-lysine acetyl transferase Neighboring gene putative deacetylase Neighboring gene putative oxoacid CoA-transferase Neighboring gene putative aminovalerate aminotransferase Neighboring gene hypothetical protein Neighboring gene putative toxin of a type I toxin family (sporulation operon) Neighboring gene protein involved in maturation of the outermost layer of the spore

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative acyloate-acetoacetate CoA-transferase
NP_389853.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15150230, 21538109, 24914178; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2143022..2143675 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389853.1 putative acyloate-acetoacetate CoA-transferase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389853.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    cl00339
    Location:8 → 212
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34466.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases