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ydjI hypothetical protein [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939493, updated on 6-Oct-2023

Summary

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Gene symbol
ydjI
Gene description
hypothetical protein
Locus tag
BSU_06210
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU06210
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Genomic context

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Sequence:
NC_000964.3 (673814..674785)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene phage shock protein A homolog regulator; prophage region 3 Neighboring gene putative phage replication protein; prophage region 3 Neighboring gene conserved hypothetical protein; prophage region 3 Neighboring gene putative membrane associated potassium channel; prophage region 3 Neighboring gene myo-inositol transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
hypothetical protein
NP_388502.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 22720735; Product type h: extrachromosomal origin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388502.1 putative phage protein [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388502.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KNW6
    Conserved Domains (1) summary
    COG4260
    Location:1 → 323
    YdjI; Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34789.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases