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ycsD putative hydroxyacyl-(acyl carrier protein) dehydratase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938260, updated on 6-Jun-2024

Summary

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Gene symbol
ycsD
Gene description
putative hydroxyacyl-(acyl carrier protein) dehydratase
Locus tag
BSU_04030
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU04030
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Genomic context

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Sequence:
NC_000964.3 (455346..455738)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene type I signal peptidase Neighboring gene putative hydrolase Neighboring gene hypothetical protein Neighboring gene 5-amino-6-ribitylamino-2,4(1H, 3H)-pyrimidinedione 5'-phosphate phosphatase / 5' nucleotidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative hydroxyacyl-(acyl carrier protein) dehydratase
NP_388285.2
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 12682299, 16291680, 22720735; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388285.2 putative hydroxyacyl-(acyl carrier protein) dehydratase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388285.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G578
    Conserved Domains (1) summary
    cd01288
    Location:6 → 128
    FabZ; FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P42961.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases