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sufL deglycase; general stress protecting enzyme; protects against methylglyoxal toxicity [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937603, updated on 6-Jun-2024

Summary

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Gene symbol
sufL
Gene description
deglycase; general stress protecting enzyme; protects against methylglyoxal toxicity
Locus tag
BSU_27020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU27020
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Genomic context

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Sequence:
NC_000964.3 (2757492..2758001)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative carboxymuconolactone decarboxylase Neighboring gene putative aldehyde dehydrogenase; carbonyl stress response Neighboring gene levanase Neighboring gene hypothetical protein Neighboring gene phosphotransferase system (PTS) fructose-specific enzyme IID component

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide responses to carbonyl electrophiles in Bacillus subtilis: control of the thiol-dependent formaldehyde dehydrogenase AdhA and cysteine proteinase YraA by the MerR-family regulator YraB (AdhR). Nguyen TT, et al. Mol Microbiol, 2009 Feb. PMID 19170879
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. YraA is specifically involved in degradation or repair of damaged thiol-containing proteins.
    Title: Genome-wide responses to carbonyl electrophiles in Bacillus subtilis: control of the thiol-dependent formaldehyde dehydrogenase AdhA and cysteine proteinase YraA by the MerR-family regulator YraB (AdhR).
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General gene information

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Homology

General protein information

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Preferred Names
deglycase; general stress protecting enzyme; protects against methylglyoxal toxicity
NP_390580.2
  • Evidence 2a: Function from experimental evidences in other organisms; PubMedId: 12775685, 17257049, 17933887, 24330391, 26774339; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390580.2 deglycase; general stress protecting enzyme; protects against methylglyoxal toxicity [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390580.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4FZ95
    Conserved Domains (1) summary
    cd03134
    Location:4 → 167
    GATase1_PfpI_like; A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O06006.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases