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ytkC putative autolytic amidase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937209, updated on 12-Feb-2021

Summary

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Gene symbol
ytkC
Gene description
putative autolytic amidase
Locus tag
BSU_30640
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU30640
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Genomic context

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Sequence:
NC_000964.3 (3135668..3136072, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative ABC anion transporter component, ATP-binding Neighboring gene putative permease of ABC anion transporter Neighboring gene nucleoside and RNA triphosphate phosphohydrolase Neighboring gene DNA-protecting protein, mini-ferritin Neighboring gene hypothetical protein Neighboring gene putative lipoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative autolytic amidase
NP_390942.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15849754, 16850406; Product type h: extrachromosomal origin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3135668..3136072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390942.1 putative autolytic amidase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390942.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG4824
    Location:3 → 134
    COG4824; Phage-related holin (Lysis protein) [Mobilome: prophages, transposons]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34883.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases