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CERVgp5 Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease; Reverse transcriptase] [ Carnation etched ring virus ]

Gene ID: 935429, updated on 18-Aug-2023

Summary

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Gene symbol
CERVgp5
Gene description
Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease; Reverse transcriptase]
Locus tag
CERVgp5
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Carnation etched ring virus
Lineage
Viruses; Retro-transcribing viruses; Caulimoviridae; Caulimovirus
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Genomic context

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Sequence:
NC_003498.1 (3353..5332)

NC_003498.1Genomic Context describing neighboring genes Neighboring gene Movement protein Neighboring gene Aphid transmission protein Neighboring gene DNA-binding protein Neighboring gene Coat protein Neighboring gene Inclusion body matrix protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003498.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence of carnation etched ring virus DNA: comparison with cauliflower mosaic virus and retroviruses. Hull R, et al. EMBO J, 1986 Dec 1. PMID 16453731, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease; Reverse transcriptase]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003498.1 Reference assembly

    Range
    3353..5332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_612577.1 Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease; Reverse transcriptase] [Carnation etched ring virus]

    See identical proteins and their annotated locations for NP_612577.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P05400
    UniProtKB/TrEMBL
    Q5W1F1
    Conserved Domains (4) summary
    cd01647
    Location:255 → 436
    RT_LTR; RT_LTR: Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the ...
    cd09274
    Location:531 → 650
    RNase_HI_RT_Ty3; Ty3/Gypsy family of RNase HI in long-term repeat retroelements
    pfam00078
    Location:279 → 436
    RVT_1; Reverse transcriptase (RNA-dependent DNA polymerase)
    pfam02160
    Location:8 → 206
    Peptidase_A3; Cauliflower mosaic virus peptidase (A3)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
1301227E.1
P05400.1

Gene LinkOut

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