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ODAD1 outer dynein arm docking complex subunit 1 [ Homo sapiens (human) ]

Gene ID: 93233, updated on 23-Nov-2021

Summary

Official Symbol
ODAD1provided by HGNC
Official Full Name
outer dynein arm docking complex subunit 1provided by HGNC
Primary source
HGNC:HGNC:26560
See related
Ensembl:ENSG00000105479 MIM:615038
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CILD20; CCDC114
Summary
This gene encodes a coiled-coil domain-containing protein that is a component of the outer dynein arm docking complex in cilia cells. Mutations in this gene may cause primary ciliary dyskinesia 20. [provided by RefSeq, May 2013]
Expression
Biased expression in testis (RPKM 9.6), lung (RPKM 2.2) and 3 other tissues See more
Orthologs
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Genomic context

See ODAD1 in Genome Data Viewer
Location:
19q13.33
Exon count:
17
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (48296452..48321971, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (48799709..48825228, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene caspase recruitment domain family member 8 Neighboring gene CARD8 antisense RNA 1 Neighboring gene ZNF114 antisense RNA 1 Neighboring gene zinc finger protein 114 Neighboring gene Sharpr-MPRA regulatory region 8297 Neighboring gene Sharpr-MPRA regulatory region 73 Neighboring gene epithelial membrane protein 3 Neighboring gene transmembrane protein 143

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ32926

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium movement IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in cilium movement IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in outer dynein arm assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in outer dynein arm assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in axoneme IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in axoneme IDA
Inferred from Direct Assay
more info
PubMed 
located_in cilium IDA
Inferred from Direct Assay
more info
PubMed 
part_of outer dynein arm IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
outer dynein arm-docking complex subunit 1
Names
coiled-coil domain containing 114
coiled-coil domain-containing protein 114

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033251.1 RefSeqGene

    Range
    3105..28614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001364171.2NP_001351100.1  outer dynein arm-docking complex subunit 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC008392, AK128144, AL122083, BC117431, HY002728, HY026155
    Related
    ENSP00000501363.1, ENST00000674294.1
    Conserved Domains (1) summary
    cl25732
    Location:4411
    SMC_N; RecF/RecN/SMC N terminal domain
  2. NM_144577.4NP_653178.3  outer dynein arm-docking complex subunit 1 isoform 2

    See identical proteins and their annotated locations for NP_653178.3

    Status: VALIDATED

    Source sequence(s)
    AC008392, AK057488, BC007730, BX101994, DB060305
    Consensus CDS
    CCDS12714.2
    UniProtKB/Swiss-Prot
    Q96M63
    Related
    ENSP00000318429.7, ENST00000315396.7
    Conserved Domains (1) summary
    cl19816
    Location:23130
    Hydantoinase_B; Hydantoinase B/oxoprolinase

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    48296452..48321971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001135193.1: Suppressed sequence

    Description
    NM_001135193.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
  2. NM_001135194.1: Suppressed sequence

    Description
    NM_001135194.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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