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ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like [ Homo sapiens (human) ]

Gene ID: 92092, updated on 4-Dec-2022

Summary

Official Symbol
ZC3HAV1Lprovided by HGNC
Official Full Name
zinc finger CCCH-type containing, antiviral 1 likeprovided by HGNC
Primary source
HGNC:HGNC:22423
See related
Ensembl:ENSG00000146858 AllianceGenome:HGNC:22423
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C7orf39
Summary
Located in cytosol. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in placenta (RPKM 3.2), skin (RPKM 3.2) and 24 other tissues See more
Orthologs
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Genomic context

See ZC3HAV1L in Genome Data Viewer
Location:
7q34
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (139021498..139036042, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (140338614..140348950, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (138710452..138720788, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene KIAA1549 Neighboring gene RNA, U6 small nuclear 1272, pseudogene Neighboring gene Sharpr-MPRA regulatory region 8027 Neighboring gene uncharacterized LOC107986852 Neighboring gene microRNA 10399 Neighboring gene zinc finger CCCH-type containing, antiviral 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC14289

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
zinc finger CCCH-type antiviral protein 1-like
Names
zinc finger CCCH-type, antiviral 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080660.4NP_542391.2  zinc finger CCCH-type antiviral protein 1-like

    See identical proteins and their annotated locations for NP_542391.2

    Status: VALIDATED

    Source sequence(s)
    AC083868, BC008842
    Consensus CDS
    CCDS5850.1
    UniProtKB/Swiss-Prot
    Q8WUD9, Q96H79
    Related
    ENSP00000275766.1, ENST00000275766.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    139021498..139036042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011516688.4XP_011514990.1  zinc finger CCCH-type antiviral protein 1-like isoform X1

  2. XM_006716176.4XP_006716239.1  zinc finger CCCH-type antiviral protein 1-like isoform X2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    140338614..140348950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)