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NEK2-DT NEK2 divergent transcript [ Homo sapiens (human) ]

Gene ID: 91548, updated on 13-May-2022

Summary

Official Symbol
NEK2-DTprovided by HGNC
Official Full Name
NEK2 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:28085
See related
AllianceGenome:HGNC:28085
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See NEK2-DT in Genome Data Viewer
Location:
1q32.3
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (211675762..211687459)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (210921890..210933582)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (211849104..211860801)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1693 Neighboring gene Sharpr-MPRA regulatory region 10021 Neighboring gene farnesyl diphosphate synthase pseudogene 8 Neighboring gene NIMA related kinase 2 Neighboring gene Sharpr-MPRA regulatory region 55 Neighboring gene uncharacterized LOC105372904 Neighboring gene Sharpr-MPRA regulatory region 10839

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_148994.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC096637, BU507471

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    211675762..211687459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    210921890..210933582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)