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PAAG_00416 elongator complex protein [ Paracoccidioides lutzii Pb01 ]

Gene ID: 9101327, updated on 17-May-2024

Summary

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Gene symbol
PAAG_00416
Gene description
elongator complex protein
Locus tag
PAAG_00416
See related
FungiDB:PAAG_00416; VEuPathDB:PAAG_00416
Gene type
protein coding
RNA name
elongator complex protein
RefSeq status
PROVISIONAL
Organism
Paracoccidioides lutzii Pb01 (strain: Pb01)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenales incertae sedis; Paracoccidioides
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_015440947.1Genomic Context describing neighboring genes Neighboring gene 5-proFAR isomerase Neighboring gene hypothetical protein Neighboring gene succinyl-CoA ligase subunit alpha Neighboring gene SNF2 family ATP-dependent chromatin-remodeling factor snf21

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015440947.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis. Desjardins CA, et al. PLoS Genet, 2011 Oct. PMID 22046142, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of elongator holoenzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
elongator complex protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015440947.1 Reference assembly

    Range
    1544278..1546098 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002797831.1 → XP_002797877.1  elongator complex protein [Paracoccidioides lutzii Pb01]

    See identical proteins and their annotated locations for XP_002797877.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C1GPH1
    Conserved Domains (3) summary
    cd01335
    Location:118 → 376
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR01211
    Location:51 → 570
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
    pfam16199
    Location:336 → 414
    Radical_SAM_C; Radical_SAM C-terminal domain
Nucleotide Protein
Heading Accession and Version

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