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ZFAND2A zinc finger AN1-type containing 2A [ Homo sapiens (human) ]

Gene ID: 90637, updated on 24-Nov-2020

Summary

Official Symbol
ZFAND2Aprovided by HGNC
Official Full Name
zinc finger AN1-type containing 2Aprovided by HGNC
Primary source
HGNC:HGNC:28073
See related
Ensembl:ENSG00000178381 MIM:610699
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AIRAP
Expression
Ubiquitous expression in bone marrow (RPKM 5.6), liver (RPKM 4.6) and 25 other tissues See more
Orthologs

Genomic context

See ZFAND2A in Genome Data Viewer
Location:
7p22.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20201120 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (1148850..1160196, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (1192543..1199855, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene chromosome 7 open reading frame 50 Neighboring gene G protein-coupled estrogen receptor 1 Neighboring gene uncharacterized LOC102723758 Neighboring gene ZFAND2A divergent transcript Neighboring gene VISTA enhancer hs293

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cellular response to arsenic-containing substance IEA
Inferred from Electronic Annotation
more info
 
positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
proteasome complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
AN1-type zinc finger protein 2A
Names
arsenite inducible RNA associated protein
zinc finger, AN1-type domain 2A

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001365381.2NP_001352310.1  AN1-type zinc finger protein 2A isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC091729
    Conserved Domains (1) summary
    pfam01428
    Location:1046
    zf-AN1; AN1-like Zinc finger
  2. NM_001365383.1NP_001352312.1  AN1-type zinc finger protein 2A isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC091729
    Related
    ENSP00000386031.1, ENST00000401903.5
    Conserved Domains (1) summary
    pfam01428
    Location:1046
    zf-AN1; AN1-like Zinc finger
  3. NM_182491.4NP_872297.2  AN1-type zinc finger protein 2A isoform 1

    See identical proteins and their annotated locations for NP_872297.2

    Status: VALIDATED

    Source sequence(s)
    AC091729, AI435373, BC029558
    Consensus CDS
    CCDS5323.1
    UniProtKB/Swiss-Prot
    Q8N6M9
    Related
    ENSP00000314619.3, ENST00000316495.8
    Conserved Domains (1) summary
    pfam01428
    Location:1046
    zf-AN1; AN1-like Zinc finger

RNA

  1. NR_158186.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC091729, BC016963, CD109464
    Related
    ENST00000397083.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20201120

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    1148850..1160196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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