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BTBD6 BTB domain containing 6 [ Homo sapiens (human) ]

Gene ID: 90135, updated on 23-Nov-2021

Summary

Official Symbol
BTBD6provided by HGNC
Official Full Name
BTB domain containing 6provided by HGNC
Primary source
HGNC:HGNC:19897
See related
Ensembl:ENSG00000184887
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BDPL
Expression
Ubiquitous expression in fat (RPKM 41.1), testis (RPKM 32.0) and 24 other tissues See more
Orthologs
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Genomic context

See BTBD6 in Genome Data Viewer
Location:
14q32.33
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (105248533..105251093)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (105714870..105717430)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene microRNA 6765 Neighboring gene jagged canonical Notch ligand 2 Neighboring gene nudix hydrolase 14 Neighboring gene BRF1 RNA polymerase III transcription initiation factor subunit Neighboring gene phosphofurin acidic cluster sorting protein 2 Neighboring gene ribosomal protein S20 pseudogene 33 Neighboring gene testis expressed 22

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in neurogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
BTB/POZ domain-containing protein 6
Names
BTB (POZ) domain containing 6
BTB domain protein BDPL
epididymis secretory sperm binding protein
glucocorticoid receptor AF-1 coactivator-1
lens BTB domain protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001387567.1NP_001374496.1  BTB/POZ domain-containing protein 6 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL512355
    Related
    ENSP00000376337.4, ENST00000392554.8
    Conserved Domains (3) summary
    cd18349
    Location:128236
    BTB_POZ_BTBD6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 6 (BTBD6)
    cd18525
    Location:236330
    BACK_BTBD6; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 6 (BTBD6)
    pfam08005
    Location:392537
    PHR; PHR domain
  2. NM_033271.3NP_150374.2  BTB/POZ domain-containing protein 6 isoform 1

    See identical proteins and their annotated locations for NP_150374.2

    Status: VALIDATED

    Source sequence(s)
    AF353674, AL512355, BU730253, DB456488
    Consensus CDS
    CCDS10002.2
    UniProtKB/Swiss-Prot
    Q96KE9
    Related
    ENSP00000443091.1, ENST00000536364.6
    Conserved Domains (3) summary
    smart00875
    Location:189295
    BACK; BTB And C-terminal Kelch
    pfam00651
    Location:76183
    BTB; BTB/POZ domain
    pfam08005
    Location:340483
    PHR; PHR domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    105248533..105251093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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