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FLJ20021 uncharacterized LOC90024 [ Homo sapiens (human) ]

Gene ID: 90024, updated on 10-Oct-2023

Summary

Gene symbol
FLJ20021
Gene description
uncharacterized LOC90024
See related
Ensembl:ENSG00000254531
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in prostate (RPKM 14.8), fat (RPKM 5.8) and 24 other tissues See more
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Genomic context

See FLJ20021 in Genome Data Viewer
Location:
4q24
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (101347777..101348883)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (104662468..104663574)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (102268934..102270040)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene protein phosphatase 3 catalytic subunit alpha Neighboring gene Sharpr-MPRA regulatory region 14793 Neighboring gene microRNA 8066 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:102225920-102226503 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15591 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15592 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15593 Neighboring gene microRNA 1255a Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21749 Neighboring gene uncharacterized LOC124900741 Neighboring gene uncharacterized LOC107986297 Neighboring gene RNA, U6 small nuclear 462, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033874.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK000028, AP001816
    Related
    ENST00000527564.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    101347777..101348883
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    104662468..104663574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)