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HVO_RS00385 ABC transporter permease [ Haloferax volcanii DS2 ]

Gene ID: 8919304, updated on 7-May-2024

Summary

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Gene symbol
HVO_RS00385
Gene description
ABC transporter permease
Locus tag
HVO_RS00385
Gene type
protein coding
Organism
Haloferax volcanii DS2 (strain: DS2, type-material: type strain of Halobacterium volcanii)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloferacaceae; Haloferax
Old locus tag
HVO_B0080
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Genomic context

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Location:
plasmid: pHV3
Sequence:
NC_013964.1 (89701..90600, complement)

NC_013964.1Genomic Context describing neighboring genes Neighboring gene DUF917 domain-containing protein Neighboring gene hydantoinase/oxoprolinase family protein Neighboring gene DUF917 domain-containing protein Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter permease Neighboring gene ABC transporter substrate-binding protein Neighboring gene SMP-30/gluconolactonase/LRE family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete genome sequence of Haloferax volcanii DS2, a model archaeon. Hartman AL, et al. PLoS One, 2010 Mar 19. PMID 20333302, Free PMC Article
  2. Structure and mechanism of ABC transporters. Wilkens S. F1000Prime Rep, 2015. PMID 25750732, Free PMC Article
  3. Structural diversity of ABC transporters. ter Beek J, et al. J Gen Physiol, 2014 Apr. PMID 24638992, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ABC transporter permease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013964.1 Reference assembly

    Range
    89701..90600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004041075.1 ABC transporter permease [Haloferax volcanii]

    See identical proteins and their annotated locations for WP_004041075.1

    UniProtKB/TrEMBL
    A0A384LHA7, A0A8T5CIK8, D4GP82, L9VID4
    Conserved Domains (3) summary
    COG1173
    Location:21 → 294
    DppC; ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]
    pfam00528
    Location:115 → 294
    BPD_transp_1; Binding-protein-dependent transport system inner membrane component
    pfam12911
    Location:28 → 74
    OppC_N; N-terminal TM domain of oligopeptide transport permease C
Nucleotide Protein
Heading Accession and Version

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