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rhcE 2-keto-3-deoxy-L-rhamnonate dehydrogenase [ Haloferax volcanii DS2 ]

Gene ID: 8919215, updated on 7-May-2024

Summary

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Gene symbol
rhcE
Gene description
2-keto-3-deoxy-L-rhamnonate dehydrogenase
Locus tag
HVO_RS00535
Gene type
protein coding
Organism
Haloferax volcanii DS2 (strain: DS2, type-material: type strain of Halobacterium volcanii)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloferacaceae; Haloferax
Old locus tag
HVO_B0110
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Genomic context

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Location:
plasmid: pHV3
Sequence:
NC_013964.1 (123935..124969)

NC_013964.1Genomic Context describing neighboring genes Neighboring gene sugar ABC transporter permease Neighboring gene carbohydrate ABC transporter permease Neighboring gene ATP-binding cassette domain-containing protein Neighboring gene L-rhamnonate dehydratase Neighboring gene TIGR03560 family F420-dependent LLM class oxidoreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. l-Rhamnose catabolism in archaea. Reinhardt A, et al. Mol Microbiol, 2019 Apr. PMID 30707467
  2. The complete genome sequence of Haloferax volcanii DS2, a model archaeon. Hartman AL, et al. PLoS One, 2010 Mar 19. PMID 20333302, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
2-keto-3-deoxy-L-rhamnonate dehydrogenase
WP_004041045.1
  • part of the rhamnose catabolism pathway

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013964.1 Reference assembly

    Range
    123935..124969
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004041045.1 2-keto-3-deoxy-L-rhamnonate dehydrogenase [Haloferax volcanii]

    See identical proteins and their annotated locations for WP_004041045.1

    UniProtKB/TrEMBL
    A0A384KG55, A0A8T5BYT3, D4GPB2, L9VIA7
    Conserved Domains (1) summary
    cl16912
    Location:1 → 306
    MDR; Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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