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HERC2P1 HERC2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 8917, updated on 23-Nov-2021

Summary

Official Symbol
HERC2P1provided by HGNC
Official Full Name
HERC2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:4869
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
D15F37S2
Annotation information
Note: On NCBI's build 37.1, HGNC and NCBI annotated this gene as HERC2P7 (HGNC id: 4875). In August 2010 it was determined by NCBI and HGNC that the this gene should be termed HERC2P1 (HGNC id: 4869). This decision was made based on PMID: 9949213 which describes the genomic location of HERC2P1 as chromosome 15:28573729..28580221(+) where HERC2P7 was annotated in Build 37.1. As of August 2010 HERC2P7 is placed at chromosome 15:23377989..23403847(+) where LOC100132101 is located in Build 37.1. [13 Feb 2013]
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Genomic context

See HERC2P1 in Genome Data Viewer
Location:
15q13.1
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (28332228..28335061)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (28577374..28580207)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene OCA2 melanosomal transmembrane protein Neighboring gene ribosomal protein L5 pseudogene 32 Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 2 Neighboring gene pectinesterase inhibitor 10-like Neighboring gene ribosomal protein L41 pseudogene 2 Neighboring gene golgin A6 family-like

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005644.6 

    Range
    101..2934
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    28332228..28335061
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_011332701.1 Reference GRCh38.p13 PATCHES

    Range
    465659..468491
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NW_003315943.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    20188..23021
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_2

Genomic

  1. NT_187660.1 Reference GRCh38.p13 ALT_REF_LOCI_2

    Range
    579445..582277
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    GenBank, FASTA, Sequence Viewer (Graphics)
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