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NAEGRDRAFT_48621 uncharacterized protein [ Naegleria gruberi ]

Gene ID: 8850371, updated on 30-Nov-2023

Summary

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Gene symbol
NAEGRDRAFT_48621
Gene description
uncharacterized protein
Locus tag
NAEGRDRAFT_48621
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Naegleria gruberi (strain: NEG-M)
Lineage
Eukaryota; Discoba; Heterolobosea; Tetramitia; Eutetramitia; Vahlkampfiidae; Naegleria
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Genomic context

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Location:
chromosome: Unknown
Exon count:
1

NW_003163307.1Genomic Context describing neighboring genes Neighboring gene HMG box domain-containing protein Neighboring gene EF-hand domain-containing protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003163307.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Naegleria gruberi illuminates early eukaryotic versatility. Fritz-Laylin LK, et al. Cell, 2010 Mar 5. PMID 20211133

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003163307.1 Reference assembly

    Range
    244921..246573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002677846.1 → XP_002677892.1  uncharacterized protein NAEGRDRAFT_48621 [Naegleria gruberi]

    See identical proteins and their annotated locations for XP_002677892.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D2VDI6
    Conserved Domains (1) summary
    cl24013
    Location:56 → 175
    B_lectin; Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically ...
Nucleotide Protein
Heading Accession and Version

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