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PSPHP1 phosphoserine phosphatase pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 8781, updated on 8-Jul-2021

Summary

Official Symbol
PSPHP1provided by HGNC
Official Full Name
phosphoserine phosphatase pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:9578
See related
MIM:604239
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CO9; PSPHL
Summary
This gene is significantly upregulated in Fanconi's anemia fibroblasts but downregulated or absent in fibroblasts from normal donors. It is also highly expressed in FA B-cells of complementation group A. [provided by RefSeq, Jul 2008]
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Genomic context

See PSPHP1 in Genome Data Viewer
Location:
7p11.2
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (55764797..55773683)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (55832490..55841376)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein FLJ44672 Neighboring gene uncharacterized LOC102723656 Neighboring gene RNA, U6 small nuclear 1126, pseudogene Neighboring gene septin 14 Neighboring gene capicua transcriptional repressor pseudogene 12

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • L-3-phosphoserine-phosphatase homolog

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables magnesium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables phosphoserine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in L-serine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in dephosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nuclear envelope TAS
Traceable Author Statement
more info
 
located_in nucleoplasm TAS
Traceable Author Statement
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009001.3 

    Range
    101..8987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    55764797..55773683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_003832.1: Suppressed sequence

    Description
    NM_003832.1: This RefSeq was permanently suppressed because this locus is considered to be a pseudogene.
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