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HTUR_RS05365 MEDS domain-containing protein [ Haloterrigena turkmenica DSM 5511 ]

Gene ID: 8741671, updated on 15-Apr-2023

Summary

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Gene symbol
HTUR_RS05365
Gene description
MEDS domain-containing protein
Locus tag
HTUR_RS05365
Gene type
protein coding
Organism
Haloterrigena turkmenica DSM 5511 (strain: DSM 5511, type-material: type strain of Halococcus turkmenicus)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena
Old locus tag
Htur_1083
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Genomic context

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Sequence:
NC_013743.1 (1132496..1135417, complement)

NC_013743.1Genomic Context describing neighboring genes Neighboring gene flap endonuclease-1 Neighboring gene hypothetical protein Neighboring gene FAD-dependent oxidoreductase Neighboring gene HalOD1 output domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013743.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of dcmR, the regulatory gene governing expression of dichloromethane dehalogenase in Methylobacterium sp. strain DM4. La Roche SD, et al. J Bacteriol, 1991 Nov. PMID 1938878, Free PMC Article
  2. MEDS and PocR are novel domains with a predicted role in sensing simple hydrocarbon derivatives in prokaryotic signal transduction systems. Anantharaman V, et al. Bioinformatics, 2005 Jun 15. PMID 15814558
  3. Complete genome sequence of Haloterrigena turkmenica type strain (4k). Saunders E, et al. Stand Genomic Sci, 2010 Feb 28. PMID 21304683, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
MEDS domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013743.1 Reference assembly

    Range
    1132496..1135417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012942284.1 MEDS domain-containing protein [Haloterrigena turkmenica]

    See identical proteins and their annotated locations for WP_012942284.1

    UniProtKB/TrEMBL
    D2RZ51
    Conserved Domains (5) summary
    cd00082
    Location:749 → 815
    HisKA; Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via ...
    smart00387
    Location:860 → 970
    HATPase_c; Histidine kinase-like ATPases
    COG2203
    Location:268 → 407
    FhlA; GAF domain [Signal transduction mechanisms]
    pfam13492
    Location:437 → 572
    GAF_3; GAF domain
    pfam14417
    Location:45 → 203
    MEDS; MEDS: MEthanogen/methylotroph, DcmR Sensory domain
Nucleotide Protein
Heading Accession and Version

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