U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DDB_G0282611 phosphopantothenatecysteine ligase [ Dictyostelium discoideum AX4 ]

Gene ID: 8623692, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
DDB_G0282611
Gene description
phosphopantothenatecysteine ligase
Primary source
dictyBase:DDB_G0282611
Locus tag
DDB_G0282611
Gene type
protein coding
RNA name
phosphopantothenatecysteine ligase
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0204867; DDBDRAFT_0231514; DDB_0204867; DDB_0231514
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_007089.4 (6001079..6002350)

Chromosome 3 - NC_007089.4Genomic Context describing neighboring genes Neighboring gene ceramide synthase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene DUF185 family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_007089.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables ligase activity IEA
Inferred from Electronic Annotation
more info
  
enables molecular_function ND
No biological Data available
more info
  
enables phosphopantothenate--cysteine ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in coenzyme A biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within coenzyme A biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Names
phosphopantothenatecysteine ligase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007089.4 Reference assembly

    Range
    6001079..6002350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_635062.1 → XP_640154.1  phosphopantothenatecysteine ligase [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_640154.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q54S85
    Conserved Domains (1) summary
    cl04410
    Location:177 → 294
    DFP; DNA / pantothenate metabolizm flavoprotein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q54S85.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous