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pyd3 hypothetical protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8619610, updated on 18-Sep-2024

Summary

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Official Symbol
pyd3
Official Full Name
hypothetical protein
Primary source
dictyBase:DDB_G0274123
Locus tag
DDB_G0274123
See related
AmoebaDB:DDB_G0274123; VEuPathDB:DDB_G0274123
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
Old locus tag
DDBDRAFT_0167649; DDBDRAFT_0185221; DDB_0167649; DDB_0185221
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_007088.5 (4571492..4572853)

Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene histidine kinase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene GTP-specific succinyl-CoA synthetase beta subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007088.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic analysis of Legionella-containing phagosomes isolated from Dictyostelium. Shevchuk O, et al. Int J Med Microbiol, 2009 Nov. PMID 19482547
  2. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
  3. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables beta-ureidopropionase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables beta-ureidopropionase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in beta-alanine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in beta-alanine biosynthetic process via 3-ureidopropionate IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in phagocytic vesicle HDA PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_644181.1
  • beta-alanine synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007088.5 Reference assembly

    Range
    4571492..4572853
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_639089.1 → XP_644181.1  hypothetical protein DDB_G0274123 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_644181.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q554Z2, Q964D8
    Conserved Domains (2) summary
    cd07587
    Location:8 → 374
    ML_beta-AS; mammalian-like beta-alanine synthase (beta-AS) and similar proteins (class 5 nitrilases)
    PLN00202
    Location:5 → 390
    PLN00202; beta-ureidopropionase
Nucleotide Protein
Heading Accession and Version

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