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sas10 U3 small nucleolar ribonucleoprotein [ Dictyostelium discoideum AX4 ]

Gene ID: 8617399, updated on 18-Sep-2024

Summary

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Official Symbol
sas10
Official Full Name
U3 small nucleolar ribonucleoprotein
Primary source
dictyBase:DDB_G0269972
Locus tag
DDB_G0269972
See related
AmoebaDB:DDB_G0269972; VEuPathDB:DDB_G0269972
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
Old locus tag
DDBDRAFT_0190708; DDBDRAFT_0237495; DDB_0190708; DDB_0237495
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_007087.3 (3952196..3954580, complement)

Chromosome 1 - NC_007087.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007087.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within rRNA processing ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
U3 small nucleolar ribonucleoprotein
Names
U3 snoRNP protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007087.3 Reference assembly

    Range
    3952196..3954580 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_641348.1 → XP_646440.1  U3 snoRNP protein [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_646440.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q55CP1
    Conserved Domains (2) summary
    pfam04000
    Location:231 → 310
    Sas10_Utp3; Sas10/Utp3/C1D family
    pfam09368
    Location:613 → 681
    Sas10; Sas10 C-terminal domain
Nucleotide Protein
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