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orcB origin recognition complex subunit 2 [ Dictyostelium discoideum AX4 ]

Gene ID: 8617339, updated on 23-Nov-2023

Summary

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Gene symbol
orcB
Gene description
origin recognition complex subunit 2
Primary source
dictyBase:DDB_G0269894
Locus tag
DDB_G0269894
Gene type
protein coding
RNA name
origin recognition complex subunit 2
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0190652; DDBDRAFT_0231726; DDB_0190652; DDB_0231726
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_007087.3 (3810811..3812262)

Chromosome 1 - NC_007087.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene cellular retinaldehyde-binding/triple function domain-containing protein Neighboring gene calcium-activated BK potassium channel, alpha subunit Neighboring gene RabGAP/TBC domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007087.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Localization and organization of protein factors involved in chromosome inheritance in Dictyostelium discoideum. Kaller M, et al. Biol Chem, 2007 Apr. PMID 17391056
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. OrcB is associated with the centrosome throughout the cell cycle, and is required for different processes in chromosome inheritance.
    Title: Localization and organization of protein factors involved in chromosome inheritance in Dictyostelium discoideum.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA replication origin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
  
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
colocalizes_with centrosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
part_of nuclear origin of replication recognition complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of origin recognition complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
origin recognition complex subunit 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007087.3 Reference assembly

    Range
    3810811..3812262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_641292.1 → XP_646384.1  origin recognition complex subunit 2 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_646384.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q55CU7
    Conserved Domains (1) summary
    pfam04084
    Location:33 → 374
    ORC2; Origin recognition complex subunit 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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