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CBG04541 Protein CBG04541 [ Caenorhabditis briggsae ]

Gene ID: 8579755, updated on 30-Nov-2023

Summary

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Gene symbol
CBG04541
Gene description
Protein CBG04541
Locus tag
CBG_04541
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_013488.2 (14362585..14363803)

Chromosome V - NC_013488.2Genomic Context describing neighboring genes Neighboring gene Protein CBG04539 Neighboring gene Protein CBG04540 Neighboring gene tRNA Neighboring gene Protein CBG04542 Neighboring gene Protein CBG04543

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013488.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG04541
XP_045092705.1
  • contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013488.2 Reference assembly

    Range
    14362585..14363803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045238098.1 → XP_045092705.1  Protein CBG04541 [Caenorhabditis briggsae]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8WXV2
    Conserved Domains (1) summary
    smart00194
    Location:18 → 259
    PTPc; Protein tyrosine phosphatase, catalytic domain
Nucleotide Protein
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