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CBG02460 Protein CBG02460 [ Caenorhabditis briggsae ]

Gene ID: 8572282, updated on 30-Nov-2023

Summary

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Gene symbol
CBG02460
Gene description
Protein CBG02460
Locus tag
CBG_02460
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See CBG02460 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_013486.2 (10075636..10076465)

Chromosome II - NC_013486.2Genomic Context describing neighboring genes Neighboring gene Protein CBR-ZYG-1 Neighboring gene Protein CBR-BLI-2 Neighboring gene Protein CBG25637 Neighboring gene Protein CBR-DDL-1 Neighboring gene Protein CBG02458

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013486.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in lysosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in organelle transport along microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BORC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG02460
XP_002630766.1
  • contains similarity to Pfam domain PF10158 Tumour suppressor protein contains similarity to Interpro domain IPR018780 (Tumour suppressor protein, LOH1CR12);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013486.2 Reference assembly

    Range
    10075636..10076465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002630720.1 → XP_002630766.1  Protein CBG02460 [Caenorhabditis briggsae]

    See identical proteins and their annotated locations for XP_002630766.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8WU98
    Conserved Domains (1) summary
    pfam10158
    Location:68 → 199
    LOH1CR12; Tumour suppressor protein
Nucleotide Protein
Heading Accession and Version

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