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BRE5 Bre5p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855787, updated on 5-Jun-2017
Gene symbol
BRE5
Gene description
Bre5p
Primary source
SGD:S000005334
Locus tag
YNR051C
Gene type
protein coding
RNA name
Bre5p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See BRE5 in Map Viewer
Location:
chromosome: XIV
Exon count:
1
Sequence:
Chromosome: XIV; NC_001146.8 (716780..718327, complement)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene saccharopine dehydrogenase (NADP+, L-glutamate-forming) Neighboring gene ncRNA Neighboring gene CCR4-NOT core DEDD family RNase subunit POP2 Neighboring gene putative GTPase NOG2 Neighboring gene ncRNA

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Mitophagy - yeast, organism-specific biosystem (from KEGG)
    Mitophagy - yeast, organism-specific biosystemMitophagy, which refers to the selective elimination of impaired or excessive mitochondria, is considered to be the main mechanism for mitochondria quality and quantity control. In yeast, oxidative s...
  • Mitophagy - yeast, conserved biosystem (from KEGG)
    Mitophagy - yeast, conserved biosystemMitophagy, which refers to the selective elimination of impaired or excessive mitochondria, is considered to be the main mechanism for mitochondria quality and quantity control. In yeast, oxidative s...
Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by GO

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
mRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
protein deubiquitination IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of ER to Golgi vesicle-mediated transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of retrograde vesicle-mediated transport, Golgi to ER IMP
Inferred from Mutant Phenotype
more info
PubMed 
ribophagy IMP
Inferred from Mutant Phenotype
more info
PubMed 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
P-body IDA
Inferred from Direct Assay
more info
PubMed 
Ubp3-Bre5 deubiquitination complex IPI
Inferred from Physical Interaction
more info
PubMed 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
intracellular IEA
Inferred from Electronic Annotation
more info
 
Names
Bre5p
NP_014449.1
  • Ubiquitin protease cofactor; forms deubiquitination complex with Ubp3p that coregulates anterograde and retrograde transport between the endoplasmic reticulum and Golgi compartments; null is sensitive to brefeldin A

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 Reference assembly

    Range
    716780..718327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183228.1NP_014449.1  TPA: Bre5p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014449.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P53741
    Conserved Domains (2) summary
    cd00780
    Location:4142
    NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
    cl17169
    Location:427483
    RRM_SF; RNA recognition motif (RRM) superfamily
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