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TRS85 Trs85p [ Saccharomyces cerevisiae S288C ]

Gene ID: 851686, updated on 17-May-2024

Summary

Gene symbol
TRS85
Gene description
Trs85p
Primary source
FungiDB:YDR108W
Locus tag
YDR108W
See related
SGD:S000002515; AllianceGenome:SGD:S000002515; VEuPathDB:YDR108W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
GSG1; MUM1
Summary
Involved in several processes, including autophagy of peroxisome; organelle assembly; and piecemeal microautophagy of the nucleus. Located in Golgi apparatus; cytoplasmic vesicle; and phagophore assembly site. Part of TRAPPIII protein complex. Orthologous to human TRAPPC8 (trafficking protein particle complex subunit 8). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See TRS85 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (671269..673365)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene tRNA-Ile Neighboring gene Tmn2p Neighboring gene putative phosphotransferase Neighboring gene replication fork barrier binding protein FOB1

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
part_of TRAPPIII protein complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasmic vesicle IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol HDA PubMed 
located_in phagophore assembly site IDA
Inferred from Direct Assay
more info
PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Trs85p
NP_010393.3
  • Component of transport protein particle (TRAPP) complex III; TRAPPIII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating endosome-Golgi traffic and required for membrane expansion during autophagy and the CVT pathway; directs Ypt1p to the PAS; late post-replication meiotic role

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    671269..673365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180416.3NP_010393.3  TPA: Trs85p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010393.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VS94, P46944, Q04563
    UniProtKB/TrEMBL
    A0A8H8UN22, B3LGG7, C8Z524
    Conserved Domains (1) summary
    pfam12739
    Location:225666
    TRAPPC-Trs85; ER-Golgi trafficking TRAPP I complex 85 kDa subunit