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ECM30 Ecm30p [ Saccharomyces cerevisiae S288C ]

Gene ID: 851156, updated on 18-Sep-2024

Summary

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Official Symbol
ECM30
Official Full Name
Ecm30p
Primary source
SGD:S000004428
Locus tag
YLR436C
See related
AllianceGenome:SGD:S000004428; FungiDB:YLR436C; VEuPathDB:YLR436C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be involved in cell wall organization. Located in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (1007421..1011245, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene calcineurin catalytic subunit A Neighboring gene Tsr2p Neighboring gene Dif1p Neighboring gene ornithine-oxo-acid transaminase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001144.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Binding of the Fkh1 Forkhead Associated Domain to a Phosphopeptide within the Mph1 DNA Helicase Regulates Mating-Type Switching in Budding Yeast. Dummer AM, et al. PLoS Genet, 2016 Jun. PMID 27257873, Free PMC Article
  2. Calcofluor antifungal action depends on chitin and a functional high-osmolarity glycerol response (HOG) pathway: evidence for a physiological role of the Saccharomyces cerevisiae HOG pathway under noninducing conditions. García-Rodriguez LJ, et al. J Bacteriol, 2000 May. PMID 10762242, Free PMC Article
  3. A consensus of core protein complex compositions for Saccharomyces cerevisiae. Benschop JJ, et al. Mol Cell, 2010 Jun 25. PMID 20620961
  4. Deubiquitinating enzymes Ubp2 and Ubp15 regulate endocytosis by limiting ubiquitination and degradation of ARTs. Ho HC, et al. Mol Biol Cell, 2017 May 1. PMID 28298493, Free PMC Article
  5. A network of proteins around Rvs167p and Rvs161p, two proteins related to the yeast actin cytoskeleton. Bon E, et al. Yeast, 2000 Sep 30. PMID 10992286

See all (48) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in Golgi medial cisterna IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in Golgi trans cisterna IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ecm30p
NP_013540.1
  • hypothetical protein; may play a role in cell wall biosynthesis, mutants have abormal relative levels of mannose and glucose and have Gap1p sorting and transport defects; (GFP)-fusion protein localizes to the cytoplasm

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    1007421..1011245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182324.1 → NP_013540.1  TPA: Ecm30p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013540.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZ70, Q06673
    UniProtKB/TrEMBL
    B3RHU4, N1P093
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q06673.1

Gene LinkOut

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