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DLGAP1-AS2 DLGAP1 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 84777, updated on 13-May-2022

Summary

Official Symbol
DLGAP1-AS2provided by HGNC
Official Full Name
DLGAP1 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:28146
See related
AllianceGenome:HGNC:28146
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DLPAP1-AS2
Expression
Ubiquitous expression in colon (RPKM 1.6), endometrium (RPKM 1.4) and 24 other tissues See more
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Genomic context

See DLGAP1-AS2 in Genome Data Viewer
Location:
18p11.31
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (3603737..3610089)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (3763322..3769665)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (3603735..3610087)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene DLG associated protein 1 Neighboring gene zinc finger protein 592 pseudogene Neighboring gene DLGAP1 antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 10669 Neighboring gene uncharacterized LOC105371967 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • DLGAP1 antisense RNA 2 (non-protein coding)

Clone Names

  • FLJ33783, FLJ92483, MGC11082

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_119377.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP002478

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    3603737..3610089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    3763322..3769665
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_032691.1: Suppressed sequence

    Description
    NM_032691.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.