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C22orf23 chromosome 22 open reading frame 23 [ Homo sapiens (human) ]

Gene ID: 84645, updated on 23-Nov-2021

Summary

Official Symbol
C22orf23provided by HGNC
Official Full Name
chromosome 22 open reading frame 23provided by HGNC
Primary source
HGNC:HGNC:18589
See related
Ensembl:ENSG00000128346
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EVG1; dJ1039K5.6
Expression
Broad expression in testis (RPKM 34.3), skin (RPKM 7.9) and 15 other tissues See more
Orthologs
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Genomic context

See C22orf23 in Genome Data Viewer
Location:
22q13.1
Exon count:
8
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (37943050..37953669, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (38339057..38349676, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 900, pseudogene Neighboring gene MICAL like 1 Neighboring gene RNA polymerase II, I and III subunit F Neighboring gene Sharpr-MPRA regulatory region 10540 Neighboring gene microRNA 6820

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ32787

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001207062.1NP_001193991.1  UPF0193 protein EVG1 isoform 2

    See identical proteins and their annotated locations for NP_001193991.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal segment in the 5' UTR and an in-frame exon in the 5' CDS, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
    Source sequence(s)
    AF324466, BC031998, BI827388, BP368870, DA968042
    Consensus CDS
    CCDS74860.1
    UniProtKB/Swiss-Prot
    Q9BZE7
    UniProtKB/TrEMBL
    A0A087X0J6
    Related
    ENSP00000483445.1, ENST00000619227.4
    Conserved Domains (1) summary
    pfam05250
    Location:6191
    UPF0193; uncharacterized protein family (UPF0193)
  2. NM_032561.5NP_115950.3  UPF0193 protein EVG1 isoform 1

    See identical proteins and their annotated locations for NP_115950.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AF324466, BC031998, BI463610, BP368870, DA968042
    Consensus CDS
    CCDS13962.1
    UniProtKB/Swiss-Prot
    Q9BZE7
    UniProtKB/TrEMBL
    A0A024R1K6
    Related
    ENSP00000384667.1, ENST00000403305.6
    Conserved Domains (1) summary
    pfam05250
    Location:6212
    UPF0193; Uncharacterized protein family (UPF0193)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    37943050..37953669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005261782.3XP_005261839.1  UPF0193 protein EVG1 isoform X1

    See identical proteins and their annotated locations for XP_005261839.1

    Conserved Domains (1) summary
    pfam05250
    Location:6194
    UPF0193; uncharacterized protein family (UPF0193)
  2. XM_005261784.3XP_005261841.1  UPF0193 protein EVG1 isoform X3

    See identical proteins and their annotated locations for XP_005261841.1

    UniProtKB/TrEMBL
    A0A087X0J6
    Conserved Domains (1) summary
    pfam05250
    Location:6191
    UPF0193; uncharacterized protein family (UPF0193)
  3. XM_005261783.2XP_005261840.1  UPF0193 protein EVG1 isoform X2

    Conserved Domains (1) summary
    pfam05250
    Location:6173
    UPF0193; uncharacterized protein family (UPF0193)
  4. XM_005261781.1XP_005261838.1  UPF0193 protein EVG1 isoform X1

    See identical proteins and their annotated locations for XP_005261838.1

    Conserved Domains (1) summary
    pfam05250
    Location:6194
    UPF0193; uncharacterized protein family (UPF0193)
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