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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_047203.1 RefSeqGene
- Range
-
5051..109902
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001032730.3 → NP_001027902.1 ubiquitin carboxyl-terminal hydrolase 48 isoform b
See identical proteins and their annotated locations for NP_001027902.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the coding region, compared to variant 1. The encoded isoform (b) is much shorter and has a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
BC067261, BM462540, CA436959
- Consensus CDS
-
CCDS44084.1
- UniProtKB/Swiss-Prot
-
Q86UV5
- Related
- ENSP00000406256.2, ENST00000421625.6
- Conserved Domains (1) summary
-
- cd02668
Location:90 → 419
- Peptidase_C19L; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
-
NM_001330394.3 → NP_001317323.1 ubiquitin carboxyl-terminal hydrolase 48 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AF502942, AL359815, BC104896, BQ027743, DB134378
- Consensus CDS
-
CCDS81277.1
- UniProtKB/Swiss-Prot
-
Q86UV5
- Related
- ENSP00000383157.1, ENST00000400301.5
- Conserved Domains (4) summary
-
- cd02668
Location:90 → 419
- Peptidase_C19L; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam00443
Location:89 → 418
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam06337
Location:484 → 554
- DUSP; DUSP domain
- cl00155
Location:909 → 983
- UBQ; Ubiquitin-like proteins
-
NM_001350164.2 → NP_001337093.1 ubiquitin carboxyl-terminal hydrolase 48 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site and lacks an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (d) has the same N- and C-termini, but is shorter compared to isoform a.
- Source sequence(s)
-
AF502942, AK226150, AL359815, BQ027743, BQ220710, DB134378
- Conserved Domains (2) summary
-
- cd01795
Location:862 → 968
- USP48_C; USP ubiquitin-specific protease
- cd02668
Location:90 → 418
- Peptidase_C19L; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
-
NM_001350166.2 → NP_001337095.1 ubiquitin carboxyl-terminal hydrolase 48 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses two alternate in-frame splice sites in the central coding region, compared to variant 1. The encoded isoform (e) has the same N- and C-termini, but is two aa shorter than isoform a.
- Source sequence(s)
-
AK074247, AL359815, AL834375, BC104896, BQ027743, BQ220710, DB134378
- Conserved Domains (3) summary
-
- cd01795
Location:927 → 1033
- USP48_C; USP ubiquitin-specific protease
- cd02668
Location:90 → 418
- Peptidase_C19L; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam06337
Location:483 → 553
- DUSP; DUSP domain
-
NM_001350167.2 → NP_001337096.1 ubiquitin carboxyl-terminal hydrolase 48 isoform f
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate in-frame splice site in the central coding region, compared to variant 1. The encoded isoform (f) has the same N- and C-termini, but is one aa shorter than isoform a. This isoform is the same length as isoform g, but contains a unique sequence.
- Source sequence(s)
-
AL359815, AL834375, BC104896, BM928619, BQ027743, BQ220710, DB134378
- Related
- ENSP00000431949.1, ENST00000529637.5
- Conserved Domains (3) summary
-
- cd01795
Location:928 → 1034
- USP48_C; USP ubiquitin-specific protease
- cd02668
Location:90 → 418
- Peptidase_C19L; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam06337
Location:483 → 553
- DUSP; DUSP domain
-
NM_001350168.2 → NP_001337097.1 ubiquitin carboxyl-terminal hydrolase 48 isoform g
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) uses an alternate in-frame splice site in the central coding region, compared to variant 1. The encoded isoform (g) has the same N- and C-termini, but is one aa shorter than isoform a. This isoform is the same length as isoform f, but contains a unique sequence.
- Source sequence(s)
-
AK074247, AL359815, AL834375, BC104896, BE378955, BQ027743, BQ220710, DB134378
- Conserved Domains (3) summary
-
- cd01795
Location:928 → 1034
- USP48_C; USP ubiquitin-specific protease
- cd02668
Location:90 → 419
- Peptidase_C19L; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam06337
Location:484 → 554
- DUSP; DUSP domain
-
NM_032236.8 → NP_115612.4 ubiquitin carboxyl-terminal hydrolase 48 isoform a
See identical proteins and their annotated locations for NP_115612.4
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AF502942, AL359815, BQ027743, DB134378
- Consensus CDS
-
CCDS30623.1
- UniProtKB/Swiss-Prot
- Q86UV5, Q9NXR0
- Related
- ENSP00000309262.9, ENST00000308271.14
- Conserved Domains (4) summary
-
- cd01795
Location:929 → 1035
- USP48_C; USP ubiquitin-specific protease
- cd02668
Location:90 → 419
- Peptidase_C19L; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam00443
Location:89 → 418
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam06337
Location:484 → 554
- DUSP; DUSP domain