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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286135.2 → NP_001273064.1 RNA-binding protein 4B isoform 2
See identical proteins and their annotated locations for NP_001273064.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate exon in the 3' coding region, which results in a frameshift, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
BC004951, BQ428264
- Consensus CDS
-
CCDS66144.1
- UniProtKB/Swiss-Prot
-
Q9BQ04
- UniProtKB/TrEMBL
-
E9PLB0
- Related
- ENSP00000435239.1, ENST00000531969.5
- Conserved Domains (1) summary
-
- cl17169
Location:78 → 141
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_031492.4 → NP_113680.1 RNA-binding protein 4B isoform 1
See identical proteins and their annotated locations for NP_113680.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
BC004951, BQ428264
- Consensus CDS
-
CCDS8149.1
- UniProtKB/Swiss-Prot
- B3KT83, Q9BQ04
- Related
- ENSP00000310471.4, ENST00000310046.9
- Conserved Domains (4) summary
-
- PTZ00368
Location:145 → 181
- PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
- smart00343
Location:161 → 176
- ZnF_C2HC; zinc finger
- cd12606
Location:2 → 68
- RRM1_RBM4; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 4 (RBM4)
- cd12607
Location:78 → 144
- RRM2_RBM4; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 4 (RBM4)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
66664998..66677887 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011545297.4 → XP_011543599.1 RNA-binding protein 4B isoform X1
See identical proteins and their annotated locations for XP_011543599.1
- UniProtKB/Swiss-Prot
- B3KT83, Q9BQ04
- Conserved Domains (4) summary
-
- PTZ00368
Location:145 → 181
- PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
- smart00343
Location:161 → 176
- ZnF_C2HC; zinc finger
- cd12606
Location:2 → 68
- RRM1_RBM4; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 4 (RBM4)
- cd12607
Location:78 → 144
- RRM2_RBM4; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 4 (RBM4)
-
XM_017018402.3 → XP_016873891.1 RNA-binding protein 4B isoform X1
- UniProtKB/Swiss-Prot
- B3KT83, Q9BQ04
- Conserved Domains (4) summary
-
- PTZ00368
Location:145 → 181
- PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
- smart00343
Location:161 → 176
- ZnF_C2HC; zinc finger
- cd12606
Location:2 → 68
- RRM1_RBM4; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 4 (RBM4)
- cd12607
Location:78 → 144
- RRM2_RBM4; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 4 (RBM4)
RNA
-
XR_247214.4 RNA Sequence
-
XR_247213.4 RNA Sequence
-
XR_007062509.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
66661244..66674135 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)