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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001098614.3 → NP_001092084.1 pseudouridylate synthase PUS7L isoform a
See identical proteins and their annotated locations for NP_001092084.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 5' UTR compared to variant 1. Variants 1, 2, and 3 all encode the same isoform (a).
- Source sequence(s)
-
AC016143, AC093012, AL136759, BC068502, BX647494, CR627435
- Consensus CDS
-
CCDS8743.1
- UniProtKB/Swiss-Prot
- Q6NUP2, Q9H0K6
- Related
- ENSP00000447706.1, ENST00000551923.5
- Conserved Domains (2) summary
-
- cd02576
Location:298 → 697
- PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
- cl00130
Location:22 → 49
- PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
-
NM_001098615.2 → NP_001092085.1 pseudouridylate synthase PUS7L isoform a
See identical proteins and their annotated locations for NP_001092085.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, and 3 all encode the same isoform (a).
- Source sequence(s)
-
AC016143, AC093012, BX647494, DB518759
- Consensus CDS
-
CCDS8743.1
- UniProtKB/Swiss-Prot
- Q6NUP2, Q9H0K6
- Related
- ENSP00000415899.2, ENST00000416848.6
- Conserved Domains (2) summary
-
- cd02576
Location:298 → 697
- PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
- cl00130
Location:22 → 49
- PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
-
NM_001271826.2 → NP_001258755.1 pseudouridylate synthase PUS7L isoform b
See identical proteins and their annotated locations for NP_001258755.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks the exon containing the translation start site compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a.
- Source sequence(s)
-
AC016143, AK097331, BC068502, BX647494, DA950015
- Consensus CDS
-
CCDS61104.1
- UniProtKB/Swiss-Prot
-
Q9H0K6
- Related
- ENSP00000398497.3, ENST00000431332.7
- Conserved Domains (1) summary
-
- cd02576
Location:1 → 384
- PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
-
NM_031292.5 → NP_112582.3 pseudouridylate synthase PUS7L isoform a
See identical proteins and their annotated locations for NP_112582.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 5' UTR compared to variant 1. Variants 1, 2, and 3 all encode the same isoform (a).
- Source sequence(s)
-
AC016143, AL136759, BC068502, BX647494, DA950015
- Consensus CDS
-
CCDS8743.1
- UniProtKB/Swiss-Prot
- Q6NUP2, Q9H0K6
- Related
- ENSP00000343081.5, ENST00000344862.10
- Conserved Domains (2) summary
-
- cd02576
Location:298 → 697
- PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
- cl00130
Location:22 → 49
- PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
43718992..43758790 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011538791.3 → XP_011537093.1 pseudouridylate synthase 7 homolog-like protein isoform X2
- Conserved Domains (1) summary
-
- cd02576
Location:310 → 676
- PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
-
XM_006719623.3 → XP_006719686.1 pseudouridylate synthase 7 homolog-like protein isoform X4
- Conserved Domains (1) summary
-
- cd02576
Location:310 → 588
- PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
-
XM_047429625.1 → XP_047285581.1 pseudouridylate synthase 7 homolog-like protein isoform X3
-
XM_011538790.4 → XP_011537092.1 pseudouridylate synthase 7 homolog-like protein isoform X1
- Conserved Domains (2) summary
-
- cd02576
Location:307 → 706
- PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
- cl00130
Location:31 → 58
- PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
-
XM_047429626.1 → XP_047285582.1 pseudouridylate synthase 7 homolog-like protein isoform X5
-
XM_047429627.1 → XP_047285583.1 pseudouridylate synthase 7 homolog-like protein isoform X6
RNA
-
XR_944748.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
43677351..43717488 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)