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H2AC10P H2A clustered histone 10, pseudogene [ Homo sapiens (human) ]

Gene ID: 8333, updated on 10-Oct-2023

Summary

Official Symbol
H2AC10Pprovided by HGNC
Official Full Name
H2A clustered histone 10, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:4732
See related
Ensembl:ENSG00000218690 AllianceGenome:HGNC:4732
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
H2A/k; H2AFK; H2AFKP; pH2A/k; dJ34B20.2; HIST1H2APS4
Summary
Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This histone pseudogene is found in the large histone gene cluster on chromosome 6. [provided by RefSeq, Oct 2015]
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Genomic context

See H2AC10P in Genome Data Viewer
Location:
6p22.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (26272193..26272540, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (26140652..26140999, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (26272421..26272768, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374986 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17002 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:26269173-26269769 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24227 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24228 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24229 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24230 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24231 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24232 Neighboring gene H3 clustered histone 8 Neighboring gene H2B clustered histone 10 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:26285047-26286246 Neighboring gene H4 clustered histone 8

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • H2A histone family, member K, pseudogene
  • histone 1, H2a, pseudogene 4
  • histone cluster 1 H2A pseudogene 4
  • histone cluster 1, H2a, pseudogene 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000876.2 

    Range
    101..448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    26272193..26272540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    26140652..26140999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)