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KLTH0A02970g KLTH0A02970p [ Lachancea thermotolerans CBS 6340 ]

Gene ID: 8290386, updated on 21-Dec-2023

Summary

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Gene symbol
KLTH0A02970g
Gene description
KLTH0A02970p
Locus tag
KLTH0A02970g
Gene type
protein coding
RNA name
KLTH0A02970p
RefSeq status
PROVISIONAL
Organism
Lachancea thermotolerans CBS 6340 (strain: CBS 6340)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea
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Genomic context

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Location:
chromosome: A
Exon count:
2
Sequence:
Chromosome: A; NC_013077.1 (254751..255041, complement)

Chromosome A - NC_013077.1Genomic Context describing neighboring genes Neighboring gene KLTH0A02926p Neighboring gene KLTH0A02948p Neighboring gene KLTH0A02992p Neighboring gene tRNA-Ala

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013077.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SMN-Sm protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type prespliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U4 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U5 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
KLTH0A02970p
XP_002551587.1
  • highly similar to uniprot|P40204 Saccharomyces cerevisiae YFL017W-A SMX2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013077.1 Reference assembly

    Range
    254751..255041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002551541.1 → XP_002551587.1  KLTH0A02970p [Lachancea thermotolerans CBS 6340]

    See identical proteins and their annotated locations for XP_002551587.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5DBI8
    Conserved Domains (1) summary
    cd01719
    Location:3 → 73
    Sm_G; Sm protein G
Nucleotide Protein
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