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MICPUN_109216 glycoside hydrolase family 47 protein [ Micromonas commoda ]

Gene ID: 8247490, updated on 16-Nov-2023

Summary

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Gene symbol
MICPUN_109216
Gene description
glycoside hydrolase family 47 protein
Locus tag
MICPUN_109216
Gene type
protein coding
RNA name
glycoside hydrolase family 47 protein
RefSeq status
PROVISIONAL
Organism
Micromonas commoda (strain: RCC299)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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Genomic context

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Location:
chromosome: 11
Exon count:
1
Sequence:
Chromosome: 11; NC_013048.1 (1074882..1076551, complement)

Chromosome 11 - NC_013048.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene guanylate cyclase Neighboring gene ubiquitin-protein ligase Neighboring gene glycoside hydrolase family 13 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013048.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
glycoside hydrolase family 47 protein
XP_002505356.1
  • candidate a-mannosidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013048.1 Reference assembly

    Range
    1074882..1076551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002505310.1 → XP_002505356.1  glycoside hydrolase family 47 protein [Micromonas commoda]

    See identical proteins and their annotated locations for XP_002505356.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C1EEZ2
    Conserved Domains (1) summary
    pfam01532
    Location:71 → 506
    Glyco_hydro_47; Glycosyl hydrolase family 47
Nucleotide Protein
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