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Phum_PHUM292860 alanine/glyoxylate aminotransferase 2, putative [ Pediculus humanus corporis (human body louse) ]

Gene ID: 8229688, updated on 6-Jan-2024

Summary

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Gene symbol
Phum_PHUM292860
Gene description
alanine/glyoxylate aminotransferase 2, putative
Locus tag
Phum_PHUM292860
See related
VectorBase:PHUM292860
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pediculus humanus corporis (strain: USDA, sub-species: corporis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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Genomic context

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See Phum_PHUM292860 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
8

NW_002987286.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Programmed cell death protein, putative Neighboring gene tRNA-Asp

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002987286.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alanine-glyoxylate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-alanine catabolic process, by transamination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glyoxylate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine/glyoxylate aminotransferase 2, putative
XP_002427055.1
  • encoded by transcript Phum_PHUM292860-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002987286.1 Reference assembly

    Range
    13154..15186
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002427010.1 → XP_002427055.1  alanine/glyoxylate aminotransferase 2, putative [Pediculus humanus corporis]

    See identical proteins and their annotated locations for XP_002427055.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0VLR1
    Conserved Domains (2) summary
    cd00610
    Location:50 → 465
    OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...
    COG0160
    Location:19 → 466
    GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials