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PF3D7_0925900 parasitophorous vacuolar protein 5, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 813534, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_0925900
Gene description
parasitophorous vacuolar protein 5, putative
Locus tag
PF3D7_0925900
See related
PlasmoDB:PF3D7_0925900; VEuPathDB:PF3D7_0925900
Gene type
protein coding
RNA name
parasitophorous vacuolar protein 5, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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Location:
chromosome: 9
Exon count:
2
Sequence:
Chromosome: 9; NC_004330.2 (1040713..1041516)

Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene histone deacetylase 1 Neighboring gene armadillo repeat protein, putative Neighboring gene protein kinase, putative Neighboring gene protein kinase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004330.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum. Burda PC, et al. Cell Rep, 2020 Jun 23. PMID 32579913
  2. A lipocalin mediates unidirectional heme biomineralization in malaria parasites. Matz JM, et al. Proc Natl Acad Sci U S A, 2020 Jul 14. PMID 32601225, Free PMC Article
  3. An in silico down-scaling approach uncovers novel constituents of the Plasmodium-containing vacuole. Matz JM, et al. Sci Rep, 2018 Sep 19. PMID 30232409, Free PMC Article
  4. Food vacuole proteome of the malarial parasite Plasmodium falciparum. Lamarque M, et al. Proteomics Clin Appl, 2008 Sep. PMID 21136929
  5. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A lipocalin mediates unidirectional heme biomineralization in malaria parasites.
    Title: A lipocalin mediates unidirectional heme biomineralization in malaria parasites.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by GeneDB

Process Evidence Code Pubs
acts_upstream_of_or_within response to oxidative stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in food vacuole HDA PubMed 
located_in food vacuole IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in symbiont-containing vacuole IDA
Inferred from Direct Assay
more info
 PubMed 
located_in symbiont-containing vacuole ISO
Inferred from Sequence Orthology
more info
 PubMed 

General protein information

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Preferred Names
parasitophorous vacuolar protein 5, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004330.2 Reference assembly

    Range
    1040713..1041516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001352093.1 → XP_001352129.1  parasitophorous vacuolar protein 5, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001352129.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V908, A0A024X8S9, A0A0L7K8A4, Q8I2Q0, W4IHS3, W4IZH1, W7FG51, W7FZN4, W7K8C0
Nucleotide Protein
Heading Accession and Version

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