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TSIB_RS03350 AMP phosphorylase [ Thermococcus sibiricus MM 739 ]

Gene ID: 8095668, updated on 3-Jan-2024

Summary

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Gene symbol
TSIB_RS03350
Gene description
AMP phosphorylase
Locus tag
TSIB_RS03350
Gene type
protein coding
Organism
Thermococcus sibiricus MM 739 (strain: MM 739, type-material: type strain of Thermococcus sibiricus)
Lineage
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus
Old locus tag
TSIB_0680
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Genomic context

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Sequence:
NC_012883.1 (631752..633263)

NC_012883.1Genomic Context describing neighboring genes Neighboring gene slipin family protein Neighboring gene septum site-determining protein MinD Neighboring gene hypothetical protein Neighboring gene DUF2095 family protein Neighboring gene DUF123 domain-containing protein Neighboring gene geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase Neighboring gene M55 family metallopeptidase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012883.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure analysis of archaeal AMP phosphorylase reveals two unique modes of dimerization. Nishitani Y, et al. J Mol Biol, 2013 Aug 9. PMID 23659790
  2. Enzymatic characterization of AMP phosphorylase and ribose-1,5-bisphosphate isomerase functioning in an archaeal AMP metabolic pathway. Aono R, et al. J Bacteriol, 2012 Dec. PMID 23065974, Free PMC Article
  3. Archaeal type III RuBisCOs function in a pathway for AMP metabolism. Sato T, et al. Science, 2007 Feb 16. PMID 17303759
  4. Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis. Mardanov AV, et al. Appl Environ Microbiol, 2009 Jul. PMID 19447963, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
AMP phosphorylase
WP_015848965.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012883.1 Reference assembly

    Range
    631752..633263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015848965.1 MULTISPECIES: AMP phosphorylase [Thermococcus]

    See identical proteins and their annotated locations for WP_015848965.1

    UniProtKB/Swiss-Prot
    C6A2A0
    UniProtKB/TrEMBL
    A0A101F129, A0A117L112, A0A842KXM3
    Conserved Domains (5) summary
    smart00941
    Location:424 → 481
    PYNP_C; Pyrimidine nucleoside phosphorylase C-terminal domain
    cd02775
    Location:17 → 61
    MopB_CT; Molybdopterin-Binding, C-terminal (MopB_CT) domain of the MopB superfamily of proteins, a large, diverse, heterogeneous superfamily of enzymes that, in general, bind molybdopterin as a cofactor. The MopB domain is found in a wide variety of molybdenum- ...
    TIGR03327
    Location:2 → 494
    AMP_phos; AMP phosphorylase
    pfam00591
    Location:157 → 387
    Glycos_transf_3; Glycosyl transferase family, a/b domain
    pfam02885
    Location:90 → 149
    Glycos_trans_3N; Glycosyl transferase family, helical bundle domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
C6A2A0.1

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