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CD36_22560 3-methyladenine DNA glycosidase, putative [ Candida dubliniensis CD36 ]

Gene ID: 8046271, updated on 11-Apr-2024

Summary

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Gene symbol
CD36_22560
Gene description
3-methyladenine DNA glycosidase, putative
Locus tag
CD36_22560
Gene type
protein coding
RNA name
3-methyladenine DNA glycosidase, putative
RefSeq status
PROVISIONAL
Organism
Candida dubliniensis CD36 (strain: CD36)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_012861.1 (1706304..1707365)

Chromosome 2 - NC_012861.1Genomic Context describing neighboring genes Neighboring gene peroxisomal matrix lipase, putative Neighboring gene hypothetical protein Neighboring gene hypothetical GPI-anchored protein, conserved Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012861.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans. Jackson AP, et al. Genome Res, 2009 Dec. PMID 19745113, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-3-methyladenine glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-7-methylguanine glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylated DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA alkylation repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair, AP site formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein-DNA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
3-methyladenine DNA glycosidase, putative
3MEA DNA glycosylase, putative
DNA-3-methyladenine glycosylase, putative
XP_002418730.1
  • Similar to S. cerevisiae MAG1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012861.1 Reference assembly

    Range
    1706304..1707365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002418685.1 → XP_002418730.1  3-methyladenine DNA glycosidase, putative [Candida dubliniensis CD36]

    See identical proteins and their annotated locations for XP_002418730.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B9WCB3
    Conserved Domains (2) summary
    COG0122
    Location:80 → 352
    AlkA; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [Replication, recombination and repair]
    pfam00730
    Location:153 → 294
    HhH-GPD; HhH-GPD superfamily base excision DNA repair protein
Nucleotide Protein
Heading Accession and Version

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