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LINC00574 long intergenic non-protein coding RNA 574 [ Homo sapiens (human) ]

Gene ID: 80069, updated on 28-Nov-2021

Summary

Official Symbol
LINC00574provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 574provided by HGNC
Primary source
HGNC:HGNC:21598
See related
Ensembl:ENSG00000231690
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CRALA; C6orf208; dJ182D15.1
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00574 in Genome Data Viewer
Location:
6q27
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (169790073..169802873)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (170190169..170202969)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene dynein light chain Tctex-type 2 Neighboring gene ER membrane associated RNA degradation Neighboring gene long intergenic non-protein coding RNA 242 Neighboring gene uncharacterized LOC105378149 Neighboring gene uncharacterized LOC107986674

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

General gene information

Markers

Other Names

  • chemoresistance-associated lncRNA

Clone Names

  • FLJ13162, MGC120218

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026780.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK023224, DA918406
    Related
    ENST00000420557.3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    169790073..169802873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187552.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    65275..78075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_025002.1: Suppressed sequence

    Description
    NM_025002.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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